T1KCW5_TETUR protein (Tetranychus urticae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

T1KCW5_TETUR

Uncharacterized protein. (544 aa)

Predicted Functional Partners:

T1KHK4_TETUR

0.446

T1KPY6_TETUR

0.428

T1JSE8_TETUR

0.418

T1KCH4_TETUR

0.414

T1L4Z9_TETUR

0.414

T1KD52_TETUR

0.411

T1JX97_TETUR

0.404

Your Current Organism:

Tetranychus urticae

NCBI taxonomy Id: 32264
Other names: T. urticae, red spider mite, two-spotted spider mite, twospotted mite

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1JSE8_TETUR	T1KCH4_TETUR	T1JSE8	T1KCH4	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Neur_chan_LBD domain-containing protein.	0.521
T1JSE8_TETUR	T1KCW5_TETUR	T1JSE8	T1KCW5	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein.	0.418
T1JX97_TETUR	T1KCH4_TETUR	T1JX97	T1KCH4	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Neur_chan_LBD domain-containing protein.	0.515
T1JX97_TETUR	T1KCW5_TETUR	T1JX97	T1KCW5	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein.	0.404
T1JX97_TETUR	T1L4Z9_TETUR	T1JX97	T1L4Z9	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Neur_chan_memb domain-containing protein.	0.480
T1KCH4_TETUR	T1JSE8_TETUR	T1KCH4	T1JSE8	Neur_chan_LBD domain-containing protein.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.521
T1KCH4_TETUR	T1JX97_TETUR	T1KCH4	T1JX97	Neur_chan_LBD domain-containing protein.	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.515
T1KCH4_TETUR	T1KCW5_TETUR	T1KCH4	T1KCW5	Neur_chan_LBD domain-containing protein.	Uncharacterized protein.	0.414
T1KCH4_TETUR	T1KD52_TETUR	T1KCH4	T1KD52	Neur_chan_LBD domain-containing protein.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.497
T1KCH4_TETUR	T1KHK4_TETUR	T1KCH4	T1KHK4	Neur_chan_LBD domain-containing protein.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.517
T1KCH4_TETUR	T1KPY6_TETUR	T1KCH4	T1KPY6	Neur_chan_LBD domain-containing protein.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.501
T1KCH4_TETUR	T1L4Z9_TETUR	T1KCH4	T1L4Z9	Neur_chan_LBD domain-containing protein.	Neur_chan_memb domain-containing protein.	0.434
T1KCW5_TETUR	T1JSE8_TETUR	T1KCW5	T1JSE8	Uncharacterized protein.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.418
T1KCW5_TETUR	T1JX97_TETUR	T1KCW5	T1JX97	Uncharacterized protein.	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.404
T1KCW5_TETUR	T1KCH4_TETUR	T1KCW5	T1KCH4	Uncharacterized protein.	Neur_chan_LBD domain-containing protein.	0.414
T1KCW5_TETUR	T1KD52_TETUR	T1KCW5	T1KD52	Uncharacterized protein.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.411
T1KCW5_TETUR	T1KHK4_TETUR	T1KCW5	T1KHK4	Uncharacterized protein.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.446
T1KCW5_TETUR	T1KPY6_TETUR	T1KCW5	T1KPY6	Uncharacterized protein.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.428
T1KCW5_TETUR	T1L4Z9_TETUR	T1KCW5	T1L4Z9	Uncharacterized protein.	Neur_chan_memb domain-containing protein.	0.414
T1KD52_TETUR	T1KCH4_TETUR	T1KD52	T1KCH4	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Neur_chan_LBD domain-containing protein.	0.497