STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1KGV1_TETURUncharacterized protein. (557 aa)    
Predicted Functional Partners:
T1K685_TETUR
COMM domain-containing protein.
    
 0.968
T1KAT0_TETUR
KOG2701 domain-containing protein.
    
 
 0.945
T1JWJ0_TETUR
COMM domain-containing protein.
    
 0.937
T1JXJ1_TETUR
COMM domain-containing protein.
    
 0.923
T1KV12_TETUR
COMM domain-containing protein.
    
 0.917
T1KDU3_TETUR
Uncharacterized protein.
    
 
 0.870
T1K0X0_TETUR
Uncharacterized protein.
    
 0.830
T1KHU9_TETUR
Uncharacterized protein.
   
 
 0.826
T1K5A2_TETUR
Uncharacterized protein.
    
 0.763
T1JZ32_TETUR
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.747
Your Current Organism:
Tetranychus urticae
NCBI taxonomy Id: 32264
Other names: T. urticae, red spider mite, two-spotted spider mite, twospotted mite
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