T1KQW8_TETUR protein (Tetranychus urticae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

T1KQW8_TETUR

M16C_associated domain-containing protein. (1004 aa)

Predicted Functional Partners:

T1KXD5_TETUR

0.484

T1K3K9_TETUR

0.473

T1JXW0_TETUR

0.447

T1L4V0_TETUR

0.424

T1K8M7_TETUR

0.420

T1JPL7_TETUR

0.418

T1KL19_TETUR

0.415

T1KQY2_TETUR

0.413

Your Current Organism:

Tetranychus urticae

NCBI taxonomy Id: 32264
Other names: T. urticae, red spider mite, two-spotted spider mite, twospotted mite

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1JPL7_TETUR	T1K8M7_TETUR	T1JPL7	T1K8M7	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.744
T1JPL7_TETUR	T1KL19_TETUR	T1JPL7	T1KL19	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.424
T1JPL7_TETUR	T1KQW8_TETUR	T1JPL7	T1KQW8	TPR_REGION domain-containing protein.	M16C_associated domain-containing protein.	0.418
T1JXW0_TETUR	T1K3K9_TETUR	T1JXW0	T1K3K9	Uncharacterized protein.	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.701
T1JXW0_TETUR	T1KQW8_TETUR	T1JXW0	T1KQW8	Uncharacterized protein.	M16C_associated domain-containing protein.	0.447
T1JXW0_TETUR	T1L4V0_TETUR	T1JXW0	T1L4V0	Uncharacterized protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.633
T1K3K9_TETUR	T1JXW0_TETUR	T1K3K9	T1JXW0	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Uncharacterized protein.	0.701
T1K3K9_TETUR	T1KQW8_TETUR	T1K3K9	T1KQW8	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	M16C_associated domain-containing protein.	0.473
T1K3K9_TETUR	T1L4V0_TETUR	T1K3K9	T1L4V0	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.883
T1K8M7_TETUR	T1JPL7_TETUR	T1K8M7	T1JPL7	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.744
T1K8M7_TETUR	T1KQW8_TETUR	T1K8M7	T1KQW8	Uncharacterized protein.	M16C_associated domain-containing protein.	0.420
T1KL19_TETUR	T1JPL7_TETUR	T1KL19	T1JPL7	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.424
T1KL19_TETUR	T1KQW8_TETUR	T1KL19	T1KQW8	Uncharacterized protein.	M16C_associated domain-containing protein.	0.415
T1KL19_TETUR	T1KQY2_TETUR	T1KL19	T1KQY2	Uncharacterized protein.	Peptidase_M3 domain-containing protein.	0.549
T1KL19_TETUR	T1KXD5_TETUR	T1KL19	T1KXD5	Uncharacterized protein.	A4_EXTRA domain-containing protein.	0.595
T1KQW8_TETUR	T1JPL7_TETUR	T1KQW8	T1JPL7	M16C_associated domain-containing protein.	TPR_REGION domain-containing protein.	0.418
T1KQW8_TETUR	T1JXW0_TETUR	T1KQW8	T1JXW0	M16C_associated domain-containing protein.	Uncharacterized protein.	0.447
T1KQW8_TETUR	T1K3K9_TETUR	T1KQW8	T1K3K9	M16C_associated domain-containing protein.	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.473
T1KQW8_TETUR	T1K8M7_TETUR	T1KQW8	T1K8M7	M16C_associated domain-containing protein.	Uncharacterized protein.	0.420
T1KQW8_TETUR	T1KL19_TETUR	T1KQW8	T1KL19	M16C_associated domain-containing protein.	Uncharacterized protein.	0.415