STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1KXX9_TETURDUF2236 domain-containing protein. (467 aa)    
Predicted Functional Partners:
T1JYI1_TETUR
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
   
 0.784
T1JU99_TETUR
RNA_pol_L_2 domain-containing protein.
   
 0.780
T1L043_TETUR
Uncharacterized protein.
   
 0.770
T1K9D5_TETUR
Uncharacterized protein.
   
 0.754
T1KXX4_TETUR
Uncharacterized protein.
   
 0.741
T1JQ31_TETUR
RPOLD domain-containing protein.
   
 0.740
T1JQC7_TETUR
RPOL4c domain-containing protein.
   
 0.732
T1K9Y6_TETUR
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.730
T1KYS9_TETUR
TFIIB-type domain-containing protein.
   
 0.730
T1KTI7_TETUR
Transcription elongation factor SPT5.
    
 0.724
Your Current Organism:
Tetranychus urticae
NCBI taxonomy Id: 32264
Other names: T. urticae, red spider mite, two-spotted spider mite, twospotted mite
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