STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1KYV4_TETURProtein kinase domain-containing protein. (387 aa)    
Predicted Functional Partners:
T1KV50_TETUR
RING-type domain-containing protein.
   
 0.930
T1JYT6_TETUR
Uncharacterized protein.
    
 0.924
T1JW17_TETUR
Helicase ATP-binding domain-containing protein.
    
 0.922
T1KEX6_TETUR
Uncharacterized protein.
   
 0.914
T1JTU4_TETUR
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
   
 0.910
T1L2Y8_TETUR
Uncharacterized protein.
    
 0.902
T1KSU7_TETUR
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.887
T1JQ31_TETUR
RPOLD domain-containing protein.
   
 0.830
T1KP21_TETUR
Helicase ATP-binding domain-containing protein.
    
 0.812
T1KYS9_TETUR
TFIIB-type domain-containing protein.
   
 0.810
Your Current Organism:
Tetranychus urticae
NCBI taxonomy Id: 32264
Other names: T. urticae, red spider mite, two-spotted spider mite, twospotted mite
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