STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1L186_TETURHMG box domain-containing protein. (1084 aa)    
Predicted Functional Partners:
T1JSW9_TETUR
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.
    
 0.519
T1KSF4_TETUR
Uncharacterized protein; Belongs to the actin family.
   
 0.519
T1KGY2_TETUR
Histone H2A; Belongs to the histone H2A family.
   
 0.517
T1KXQ7_TETUR
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
    
 0.498
T1KEX6_TETUR
Uncharacterized protein.
    
 0.491
T1KT21_TETUR
Tudor domain-containing protein.
    
  0.491
T1JYT6_TETUR
Uncharacterized protein.
    
 0.481
T1L2Y8_TETUR
Uncharacterized protein.
   
 0.475
T1JW17_TETUR
Helicase ATP-binding domain-containing protein.
    
 0.438
T1KSU7_TETUR
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.429
Your Current Organism:
Tetranychus urticae
NCBI taxonomy Id: 32264
Other names: T. urticae, red spider mite, two-spotted spider mite, twospotted mite
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