STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACO76778.1D-galactarate dehydratase. (517 aa)    
Predicted Functional Partners:
ACO76775.1
Dihydrodipicolinate synthetase; Belongs to the DapA family.
 
  
 0.942
ACO76777.1
D-galactonate transporter.
 
  
 0.873
hpaI
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
 
 
  0.701
ACO76779.1
D-isomer specific 2-hydroxyacid dehydrogenase.
       0.688
ACO79451.1
Transcriptional regulator, GntR family.
 
   
 0.674
ACO76772.1
Transcriptional regulatory protein, GntR family.
 
   
 0.631
mtlD
Mannitol dehydrogenase.
 
  
 0.556
dgoA
2-keto-3-deoxy-6-phosphogalactonate aldolase.
 
  
 0.534
kguK
2-ketogluconate kinase.
 
   
 0.526
ACO76776.1
Hypothetical protein.
       0.519
Your Current Organism:
Azotobacter vinelandii
NCBI taxonomy Id: 322710
Other names: A. vinelandii DJ, Azotobacter vinelandii DJ, Azotobacter vinelandii str. DJ, Azotobacter vinelandii strain DJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.