STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACO76850.1Amidophosphoribosyltransferase. (238 aa)    
Predicted Functional Partners:
dprA
DNA processing protein, DprA (SMF family).
 
 
 0.919
comA
DNA internalization-related competence protein ComA.
 
  
 0.865
ACO80885.1
Mg chelatase-related protein.
 
  
 0.849
ACO77539.1
Conserved hypothetical protein; Belongs to the UPF0102 family.
 
    0.748
aroA
3-phosphoshikimate 1-carboxyvinyltransferase / Prephenate dehydrogenase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
   
  
 0.745
coaBC-2
P-pantothenate cysteine ligase / P-pantothenoylcysteine decarboxylase; Belongs to the UPF0758 family.
 
    0.717
flgC
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.705
ACO79751.1
DNA repair protein RadC-like protein; Belongs to the UPF0758 family.
 
    0.697
ACO78703.1
Cyclic di-GMP signal transduction protein.
  
  
 0.665
ACO81151.1
Periplasmic hybrid histidine protein kinase, two-component.
  
  
 0.636
Your Current Organism:
Azotobacter vinelandii
NCBI taxonomy Id: 322710
Other names: A. vinelandii DJ, Azotobacter vinelandii DJ, Azotobacter vinelandii str. DJ, Azotobacter vinelandii strain DJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.