Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACO77193.1 | ACO77464.1 | Avin_09590 | Avin_12370 | Conserved hypothetical protein. | Sulfite reductase, NADPH flavoprotein alpha-component. | 0.668 |
ACO77193.1 | ACO77466.1 | Avin_09590 | Avin_12390 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.903 |
ACO77193.1 | ACO77467.1 | Avin_09590 | Avin_12400 | Conserved hypothetical protein. | PepSY-associated TM helix. | 0.811 |
ACO77193.1 | ACO77471.1 | Avin_09590 | Avin_12440 | Conserved hypothetical protein. | Sulfite reductase (NADPH) flavoprotein alpha-component/ iron-regulated membrane protein. | 0.642 |
ACO77193.1 | ACO78714.1 | Avin_09590 | Avin_25320 | Conserved hypothetical protein. | Membrane protein. | 0.634 |
ACO77193.1 | ACO79843.1 | Avin_09590 | Avin_36970 | Conserved hypothetical protein. | PepSY-associated TM helix domain protein. | 0.612 |
ACO77193.1 | ACO79928.1 | Avin_09590 | Avin_37840 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.575 |
ACO77193.1 | apbE | Avin_09590 | Avin_14650 | Conserved hypothetical protein. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.677 |
ACO77464.1 | ACO77193.1 | Avin_12370 | Avin_09590 | Sulfite reductase, NADPH flavoprotein alpha-component. | Conserved hypothetical protein. | 0.668 |
ACO77464.1 | ACO77465.1 | Avin_12370 | Avin_12380 | Sulfite reductase, NADPH flavoprotein alpha-component. | Hypothetical protein. | 0.817 |
ACO77464.1 | ACO77466.1 | Avin_12370 | Avin_12390 | Sulfite reductase, NADPH flavoprotein alpha-component. | Conserved hypothetical protein. | 0.791 |
ACO77464.1 | ACO77467.1 | Avin_12370 | Avin_12400 | Sulfite reductase, NADPH flavoprotein alpha-component. | PepSY-associated TM helix. | 0.793 |
ACO77464.1 | ACO77469.1 | Avin_12370 | Avin_12420 | Sulfite reductase, NADPH flavoprotein alpha-component. | 2-oxoglutarate and Fe(II)-dependent oxygenase superfamily. | 0.433 |
ACO77464.1 | ACO77471.1 | Avin_12370 | Avin_12440 | Sulfite reductase, NADPH flavoprotein alpha-component. | Sulfite reductase (NADPH) flavoprotein alpha-component/ iron-regulated membrane protein. | 0.927 |
ACO77464.1 | ACO78714.1 | Avin_12370 | Avin_25320 | Sulfite reductase, NADPH flavoprotein alpha-component. | Membrane protein. | 0.489 |
ACO77464.1 | ACO79843.1 | Avin_12370 | Avin_36970 | Sulfite reductase, NADPH flavoprotein alpha-component. | PepSY-associated TM helix domain protein. | 0.459 |
ACO77465.1 | ACO77464.1 | Avin_12380 | Avin_12370 | Hypothetical protein. | Sulfite reductase, NADPH flavoprotein alpha-component. | 0.817 |
ACO77465.1 | ACO77466.1 | Avin_12380 | Avin_12390 | Hypothetical protein. | Conserved hypothetical protein. | 0.974 |
ACO77465.1 | ACO77467.1 | Avin_12380 | Avin_12400 | Hypothetical protein. | PepSY-associated TM helix. | 0.950 |
ACO77465.1 | ACO77469.1 | Avin_12380 | Avin_12420 | Hypothetical protein. | 2-oxoglutarate and Fe(II)-dependent oxygenase superfamily. | 0.562 |
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