Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACO76400.1 | ACO78009.1 | Avin_01350 | Avin_17960 | Transcriptional regulator, XRE family. | Conserved hypothetical protein. | 0.475 |
ACO76817.1 | ACO78009.1 | Avin_05640 | Avin_17960 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.548 |
ACO78009.1 | ACO76400.1 | Avin_17960 | Avin_01350 | Conserved hypothetical protein. | Transcriptional regulator, XRE family. | 0.475 |
ACO78009.1 | ACO76817.1 | Avin_17960 | Avin_05640 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.548 |
ACO78009.1 | ACO78010.1 | Avin_17960 | Avin_17970 | Conserved hypothetical protein. | Universal stress protein family. | 0.578 |
ACO78009.1 | metG | Avin_17960 | Avin_19280 | Conserved hypothetical protein. | methionyl-tRNA synthetase, class Ia; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.412 |
ACO78009.1 | metH | Avin_17960 | Avin_29240 | Conserved hypothetical protein. | 5-methyltetrahydrofolate--homocysteine methyltransferase, MetH; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.447 |
ACO78010.1 | ACO78009.1 | Avin_17970 | Avin_17960 | Universal stress protein family. | Conserved hypothetical protein. | 0.578 |
metG | ACO78009.1 | Avin_19280 | Avin_17960 | methionyl-tRNA synthetase, class Ia; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Conserved hypothetical protein. | 0.412 |
metG | metH | Avin_19280 | Avin_29240 | methionyl-tRNA synthetase, class Ia; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 5-methyltetrahydrofolate--homocysteine methyltransferase, MetH; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.945 |
metH | ACO78009.1 | Avin_29240 | Avin_17960 | 5-methyltetrahydrofolate--homocysteine methyltransferase, MetH; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Conserved hypothetical protein. | 0.447 |
metH | metG | Avin_29240 | Avin_19280 | 5-methyltetrahydrofolate--homocysteine methyltransferase, MetH; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | methionyl-tRNA synthetase, class Ia; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.945 |