STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACO78091.1Tetratricopeptide (TPR) repeat and VWA domain-containing protein. (577 aa)    
Predicted Functional Partners:
ACO78090.1
Conserved hypothetical protein.
 
 
 0.972
ACO78094.1
Conserved hypothetical protein.
 
  
 0.969
ACO78092.1
Von Willebrand factor, type A (VWA) domain protein.
   
 0.961
ACO78093.1
Conserved hypothetical protein.
 
   
 0.948
ACO78095.1
AAA superfamily ATPase, MoxR-like protein.
 
   
 0.947
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.889
htpG
Heat shock protein HtpG; Molecular chaperone. Has ATPase activity.
  
 0.869
ACO81266.1
Ankyrin.
  
 0.857
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.735
glnK
Nitrogen regulatory protein P-II GlnK; Belongs to the P(II) protein family.
    
 
 0.720
Your Current Organism:
Azotobacter vinelandii
NCBI taxonomy Id: 322710
Other names: A. vinelandii DJ, Azotobacter vinelandii DJ, Azotobacter vinelandii str. DJ, Azotobacter vinelandii strain DJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.