STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xdhCXanthine dehydrogenase accessory protein. (280 aa)    
Predicted Functional Partners:
xdhB
Xanthine dehydrogenase, molybdopterin binding subunit.
 
  
 0.962
xdhA
Xanthine dehydrogenase, small subunit.
 
  
 0.926
ACO78417.1
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
    0.906
ACO78310.1
Conserved hypothetical protein.
 
     0.781
ACO78315.1
Hydroxyisourate hydrolase, transthyretin family protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
     0.766
ACO78313.1
Conserved hypothetical protein.
 
     0.740
trbD
P-type conjugative transfer protein TrbD.
      
 0.731
ACO78314.1
Polysaccharide deacetylase.
 
     0.730
ACO79703.1
Iron-sulfur binding oxidoreductase.
 
  
 0.674
ACO78764.1
Ferredoxin:(2Fe-2S)-binding protein.
 
  
 0.663
Your Current Organism:
Azotobacter vinelandii
NCBI taxonomy Id: 322710
Other names: A. vinelandii DJ, Azotobacter vinelandii DJ, Azotobacter vinelandii str. DJ, Azotobacter vinelandii strain DJ
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.