Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACO77761.1 | ACO78701.1 | Avin_15460 | Avin_25170 | Membrane sensor hybrid histidine protein kinase. | Hybrid histidine kinase. | 0.789 |
ACO77761.1 | ACO78711.1 | Avin_15460 | Avin_25270 | Membrane sensor hybrid histidine protein kinase. | Sensory histidine protein kinase. | 0.953 |
ACO77761.1 | ACO78718.1 | Avin_15460 | Avin_25360 | Membrane sensor hybrid histidine protein kinase. | Response regulator, LuxR family. | 0.400 |
ACO77761.1 | ACO79098.1 | Avin_15460 | Avin_29290 | Membrane sensor hybrid histidine protein kinase. | Hybrid histidine protein kinase. | 0.791 |
ACO77761.1 | ACO79648.1 | Avin_15460 | Avin_34990 | Membrane sensor hybrid histidine protein kinase. | Integral membrane hybrid histidine protein kinase. | 0.783 |
ACO77761.1 | ACO79672.1 | Avin_15460 | Avin_35230 | Membrane sensor hybrid histidine protein kinase. | Integral membrane sensor hybrid histidine protein kinase. | 0.961 |
ACO77761.1 | ACO80252.1 | Avin_15460 | Avin_41190 | Membrane sensor hybrid histidine protein kinase. | Integral membrane sensor hybrid histidine protein kinase. | 0.798 |
ACO77761.1 | ACO81151.1 | Avin_15460 | Avin_50630 | Membrane sensor hybrid histidine protein kinase. | Periplasmic hybrid histidine protein kinase, two-component. | 0.975 |
ACO77761.1 | gacS | Avin_15460 | Avin_37090 | Membrane sensor hybrid histidine protein kinase. | Alginate regulatory hybrid histidine protein kinase GacS. | 0.969 |
ACO77761.1 | retS | Avin_15460 | Avin_06870 | Membrane sensor hybrid histidine protein kinase. | Hybrid histidine protein kinase RetS. | 0.965 |
ACO78701.1 | ACO77761.1 | Avin_25170 | Avin_15460 | Hybrid histidine kinase. | Membrane sensor hybrid histidine protein kinase. | 0.789 |
ACO78701.1 | ACO78711.1 | Avin_25170 | Avin_25270 | Hybrid histidine kinase. | Sensory histidine protein kinase. | 0.952 |
ACO78701.1 | ACO78718.1 | Avin_25170 | Avin_25360 | Hybrid histidine kinase. | Response regulator, LuxR family. | 0.403 |
ACO78701.1 | ACO79098.1 | Avin_25170 | Avin_29290 | Hybrid histidine kinase. | Hybrid histidine protein kinase. | 0.780 |
ACO78701.1 | ACO79648.1 | Avin_25170 | Avin_34990 | Hybrid histidine kinase. | Integral membrane hybrid histidine protein kinase. | 0.790 |
ACO78701.1 | ACO79672.1 | Avin_25170 | Avin_35230 | Hybrid histidine kinase. | Integral membrane sensor hybrid histidine protein kinase. | 0.961 |
ACO78701.1 | ACO80252.1 | Avin_25170 | Avin_41190 | Hybrid histidine kinase. | Integral membrane sensor hybrid histidine protein kinase. | 0.798 |
ACO78701.1 | ACO81151.1 | Avin_25170 | Avin_50630 | Hybrid histidine kinase. | Periplasmic hybrid histidine protein kinase, two-component. | 0.974 |
ACO78701.1 | gacS | Avin_25170 | Avin_37090 | Hybrid histidine kinase. | Alginate regulatory hybrid histidine protein kinase GacS. | 0.969 |
ACO78701.1 | retS | Avin_25170 | Avin_06870 | Hybrid histidine kinase. | Hybrid histidine protein kinase RetS. | 0.965 |
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