Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACO78915.1 | mtlE | Avin_27410 | Avin_27400 | Hypothetical protein. | Periplasmic mannitol-binding protein of mannitol ABC transporter. | 0.514 |
ACO78915.1 | mtlF | Avin_27410 | Avin_27390 | Hypothetical protein. | Mannitol ABC transporter permease protein. | 0.402 |
ACO78915.1 | mtlR | Avin_27410 | Avin_27420 | Hypothetical protein. | Transcriptional regulator MtlR (AraC family). | 0.773 |
mtlE | ACO78915.1 | Avin_27400 | Avin_27410 | Periplasmic mannitol-binding protein of mannitol ABC transporter. | Hypothetical protein. | 0.514 |
mtlE | mtlF | Avin_27400 | Avin_27390 | Periplasmic mannitol-binding protein of mannitol ABC transporter. | Mannitol ABC transporter permease protein. | 0.999 |
mtlE | mtlR | Avin_27400 | Avin_27420 | Periplasmic mannitol-binding protein of mannitol ABC transporter. | Transcriptional regulator MtlR (AraC family). | 0.735 |
mtlF | ACO78915.1 | Avin_27390 | Avin_27410 | Mannitol ABC transporter permease protein. | Hypothetical protein. | 0.402 |
mtlF | mtlE | Avin_27390 | Avin_27400 | Mannitol ABC transporter permease protein. | Periplasmic mannitol-binding protein of mannitol ABC transporter. | 0.999 |
mtlF | mtlR | Avin_27390 | Avin_27420 | Mannitol ABC transporter permease protein. | Transcriptional regulator MtlR (AraC family). | 0.650 |
mtlR | ACO78915.1 | Avin_27420 | Avin_27410 | Transcriptional regulator MtlR (AraC family). | Hypothetical protein. | 0.773 |
mtlR | mtlE | Avin_27420 | Avin_27400 | Transcriptional regulator MtlR (AraC family). | Periplasmic mannitol-binding protein of mannitol ABC transporter. | 0.735 |
mtlR | mtlF | Avin_27420 | Avin_27390 | Transcriptional regulator MtlR (AraC family). | Mannitol ABC transporter permease protein. | 0.650 |