Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACO76588.1 | ACO78703.1 | Avin_03280 | Avin_25190 | Hybrid sensory histidine protein kinase. | Cyclic di-GMP signal transduction protein. | 0.883 |
ACO76588.1 | ACO78711.1 | Avin_03280 | Avin_25270 | Hybrid sensory histidine protein kinase. | Sensory histidine protein kinase. | 0.577 |
ACO76588.1 | ACO78810.1 | Avin_03280 | Avin_26340 | Hybrid sensory histidine protein kinase. | Cyclic di-GMP signal transduction protein. | 0.831 |
ACO76588.1 | ACO79672.1 | Avin_03280 | Avin_35230 | Hybrid sensory histidine protein kinase. | Integral membrane sensor hybrid histidine protein kinase. | 0.968 |
ACO76588.1 | ACO81151.1 | Avin_03280 | Avin_50630 | Hybrid sensory histidine protein kinase. | Periplasmic hybrid histidine protein kinase, two-component. | 0.973 |
ACO76588.1 | gacS | Avin_03280 | Avin_37090 | Hybrid sensory histidine protein kinase. | Alginate regulatory hybrid histidine protein kinase GacS. | 0.971 |
ACO76588.1 | nifL | Avin_03280 | Avin_50990 | Hybrid sensory histidine protein kinase. | Nitrogen fixation regulatory protein, NifL. | 0.538 |
ACO76588.1 | retS | Avin_03280 | Avin_06870 | Hybrid sensory histidine protein kinase. | Hybrid histidine protein kinase RetS. | 0.948 |
ACO78625.1 | ACO78703.1 | Avin_24380 | Avin_25190 | Aerotaxis receptor Aer. | Cyclic di-GMP signal transduction protein. | 0.969 |
ACO78625.1 | ACO78711.1 | Avin_24380 | Avin_25270 | Aerotaxis receptor Aer. | Sensory histidine protein kinase. | 0.427 |
ACO78625.1 | ACO78810.1 | Avin_24380 | Avin_26340 | Aerotaxis receptor Aer. | Cyclic di-GMP signal transduction protein. | 0.912 |
ACO78625.1 | ACO79672.1 | Avin_24380 | Avin_35230 | Aerotaxis receptor Aer. | Integral membrane sensor hybrid histidine protein kinase. | 0.971 |
ACO78625.1 | ACO81151.1 | Avin_24380 | Avin_50630 | Aerotaxis receptor Aer. | Periplasmic hybrid histidine protein kinase, two-component. | 0.966 |
ACO78625.1 | gacS | Avin_24380 | Avin_37090 | Aerotaxis receptor Aer. | Alginate regulatory hybrid histidine protein kinase GacS. | 0.948 |
ACO78625.1 | nifL | Avin_24380 | Avin_50990 | Aerotaxis receptor Aer. | Nitrogen fixation regulatory protein, NifL. | 0.427 |
ACO78625.1 | retS | Avin_24380 | Avin_06870 | Aerotaxis receptor Aer. | Hybrid histidine protein kinase RetS. | 0.766 |
ACO78703.1 | ACO76588.1 | Avin_25190 | Avin_03280 | Cyclic di-GMP signal transduction protein. | Hybrid sensory histidine protein kinase. | 0.883 |
ACO78703.1 | ACO78625.1 | Avin_25190 | Avin_24380 | Cyclic di-GMP signal transduction protein. | Aerotaxis receptor Aer. | 0.969 |
ACO78703.1 | ACO78711.1 | Avin_25190 | Avin_25270 | Cyclic di-GMP signal transduction protein. | Sensory histidine protein kinase. | 0.788 |
ACO78703.1 | ACO78810.1 | Avin_25190 | Avin_26340 | Cyclic di-GMP signal transduction protein. | Cyclic di-GMP signal transduction protein. | 0.981 |
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