Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACO80367.1 | ACO80369.1 | Avin_42430 | Avin_42450 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.437 |
ACO80367.1 | leuA | Avin_42430 | Avin_42440 | Conserved hypothetical protein. | Bacterial 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.784 |
ACO80367.1 | pqiA | Avin_42430 | Avin_42460 | Conserved hypothetical protein. | Paraquat-inducible protein A. | 0.437 |
ACO80367.1 | pqiA-2 | Avin_42430 | Avin_42470 | Conserved hypothetical protein. | Paraquat-inducible protein A. | 0.437 |
ACO80367.1 | rimI | Avin_42430 | Avin_42420 | Conserved hypothetical protein. | Acetylating ribosomal protein, RimI; Acetylates the N-terminal alanine of ribosomal protein S18. | 0.755 |
ACO80369.1 | ACO80367.1 | Avin_42450 | Avin_42430 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.437 |
ACO80369.1 | ACO80466.1 | Avin_42450 | Avin_43450 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.519 |
ACO80369.1 | ACO80537.1 | Avin_42450 | Avin_44160 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.712 |
ACO80369.1 | leuA | Avin_42450 | Avin_42440 | Conserved hypothetical protein. | Bacterial 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.437 |
ACO80369.1 | pqiA | Avin_42450 | Avin_42460 | Conserved hypothetical protein. | Paraquat-inducible protein A. | 0.954 |
ACO80369.1 | pqiA-2 | Avin_42450 | Avin_42470 | Conserved hypothetical protein. | Paraquat-inducible protein A. | 0.953 |
ACO80369.1 | rimI | Avin_42450 | Avin_42420 | Conserved hypothetical protein. | Acetylating ribosomal protein, RimI; Acetylates the N-terminal alanine of ribosomal protein S18. | 0.423 |
ACO80466.1 | ACO80369.1 | Avin_43450 | Avin_42450 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.519 |
ACO80466.1 | ACO80530.1 | Avin_43450 | Avin_44090 | Conserved hypothetical protein. | PqiB family protein. | 0.421 |
ACO80466.1 | pqiA | Avin_43450 | Avin_42460 | Conserved hypothetical protein. | Paraquat-inducible protein A. | 0.447 |
ACO80466.1 | pqiA-2 | Avin_43450 | Avin_42470 | Conserved hypothetical protein. | Paraquat-inducible protein A. | 0.513 |
ACO80530.1 | ACO80466.1 | Avin_44090 | Avin_43450 | PqiB family protein. | Conserved hypothetical protein. | 0.421 |
ACO80530.1 | ACO80537.1 | Avin_44090 | Avin_44160 | PqiB family protein. | Conserved hypothetical protein. | 0.797 |
ACO80530.1 | pqiA | Avin_44090 | Avin_42460 | PqiB family protein. | Paraquat-inducible protein A. | 0.806 |
ACO80530.1 | pqiA-2 | Avin_44090 | Avin_42470 | PqiB family protein. | Paraquat-inducible protein A. | 0.801 |
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