Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACO77515.1 | ACO77990.1 | Avin_12890 | Avin_17770 | STAS family protein. | Lipopolysaccharide kinase. | 0.634 |
ACO77515.1 | ACO77991.1 | Avin_12890 | Avin_17780 | STAS family protein. | Conserved hypothetical protein. | 0.683 |
ACO77515.1 | ACO78767.1 | Avin_12890 | Avin_25880 | STAS family protein. | Sulfatase protein. | 0.535 |
ACO77515.1 | ACO80586.1 | Avin_12890 | Avin_44690 | STAS family protein. | LmbE family protein. | 0.726 |
ACO77515.1 | ACO80598.1 | Avin_12890 | Avin_44810 | STAS family protein. | Conserved hypothetical protein. | 0.645 |
ACO77515.1 | ACO80599.1 | Avin_12890 | Avin_44820 | STAS family protein. | Lipopolysaccharide kinase. | 0.616 |
ACO77515.1 | ACO80932.1 | Avin_12890 | Avin_48290 | STAS family protein. | Conserved hypothetical protein. | 0.729 |
ACO77515.1 | waaP | Avin_12890 | Avin_44830 | STAS family protein. | Lipopolysaccharide kinase; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family. | 0.403 |
ACO77990.1 | ACO77515.1 | Avin_17770 | Avin_12890 | Lipopolysaccharide kinase. | STAS family protein. | 0.634 |
ACO77990.1 | ACO77991.1 | Avin_17770 | Avin_17780 | Lipopolysaccharide kinase. | Conserved hypothetical protein. | 0.951 |
ACO77990.1 | ACO78767.1 | Avin_17770 | Avin_25880 | Lipopolysaccharide kinase. | Sulfatase protein. | 0.735 |
ACO77990.1 | ACO80586.1 | Avin_17770 | Avin_44690 | Lipopolysaccharide kinase. | LmbE family protein. | 0.673 |
ACO77990.1 | ACO80597.1 | Avin_17770 | Avin_44800 | Lipopolysaccharide kinase. | Carbamoyltransferase. | 0.742 |
ACO77990.1 | ACO80598.1 | Avin_17770 | Avin_44810 | Lipopolysaccharide kinase. | Conserved hypothetical protein. | 0.800 |
ACO77990.1 | ACO80599.1 | Avin_17770 | Avin_44820 | Lipopolysaccharide kinase. | Lipopolysaccharide kinase. | 0.822 |
ACO77990.1 | ACO80932.1 | Avin_17770 | Avin_48290 | Lipopolysaccharide kinase. | Conserved hypothetical protein. | 0.775 |
ACO77990.1 | waaG | Avin_17770 | Avin_44840 | Lipopolysaccharide kinase. | Lipopolysaccharide core biosynthesis protein. | 0.804 |
ACO77990.1 | waaP | Avin_17770 | Avin_44830 | Lipopolysaccharide kinase. | Lipopolysaccharide kinase; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family. | 0.810 |
ACO77991.1 | ACO77515.1 | Avin_17780 | Avin_12890 | Conserved hypothetical protein. | STAS family protein. | 0.683 |
ACO77991.1 | ACO77990.1 | Avin_17780 | Avin_17770 | Conserved hypothetical protein. | Lipopolysaccharide kinase. | 0.951 |
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