STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACO80932.1Conserved hypothetical protein. (305 aa)    
Predicted Functional Partners:
ACO77990.1
Lipopolysaccharide kinase.
 
   
 0.775
ACO80598.1
Conserved hypothetical protein.
  
     0.765
waaP
Lipopolysaccharide kinase; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
  
     0.761
ACO80599.1
Lipopolysaccharide kinase.
  
     0.748
ACO78767.1
Sulfatase protein.
  
     0.745
waaG
Lipopolysaccharide core biosynthesis protein.
  
     0.742
ACO77991.1
Conserved hypothetical protein.
  
   
 0.737
ACO80586.1
LmbE family protein.
  
     0.736
ACO77515.1
STAS family protein.
  
     0.729
ACO80597.1
Carbamoyltransferase.
  
     0.697
Your Current Organism:
Azotobacter vinelandii
NCBI taxonomy Id: 322710
Other names: A. vinelandii DJ, Azotobacter vinelandii DJ, Azotobacter vinelandii str. DJ, Azotobacter vinelandii strain DJ
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