Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACO76704.1 | cooS | Avin_04480 | Avin_04490 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | Carbon-monoxide dehydrogenase, catalytic subunit. | 0.946 |
| ACO76704.1 | hmp | Avin_04480 | Avin_51090 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | Flavohemoglobin Hmp; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily. | 0.753 |
| ACO76704.1 | nasB | Avin_04480 | Avin_23350 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | Assimilatory nitrate reductase, NasB; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.961 |
| ACO78018.1 | hmp | Avin_18050 | Avin_51090 | Globin-like protein. | Flavohemoglobin Hmp; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily. | 0.664 |
| ACO80337.1 | ACO80844.1 | Avin_42100 | Avin_47390 | Ferredoxin:Oxidoreductase FAD/NAD(P)-binding. | Oxidoreductase protein. | 0.946 |
| ACO80337.1 | benC | Avin_42100 | Avin_08610 | Ferredoxin:Oxidoreductase FAD/NAD(P)-binding. | Benzoate 1,2-Dioxygenase Reductase. | 0.497 |
| ACO80337.1 | hmp | Avin_42100 | Avin_51090 | Ferredoxin:Oxidoreductase FAD/NAD(P)-binding. | Flavohemoglobin Hmp; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily. | 0.580 |
| ACO80337.1 | nasB | Avin_42100 | Avin_23350 | Ferredoxin:Oxidoreductase FAD/NAD(P)-binding. | Assimilatory nitrate reductase, NasB; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.451 |
| ACO80844.1 | ACO80337.1 | Avin_47390 | Avin_42100 | Oxidoreductase protein. | Ferredoxin:Oxidoreductase FAD/NAD(P)-binding. | 0.946 |
| ACO80844.1 | benC | Avin_47390 | Avin_08610 | Oxidoreductase protein. | Benzoate 1,2-Dioxygenase Reductase. | 0.540 |
| ACO80844.1 | hmp | Avin_47390 | Avin_51090 | Oxidoreductase protein. | Flavohemoglobin Hmp; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily. | 0.600 |
| ACO80844.1 | nasB | Avin_47390 | Avin_23350 | Oxidoreductase protein. | Assimilatory nitrate reductase, NasB; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.451 |
| benC | ACO80337.1 | Avin_08610 | Avin_42100 | Benzoate 1,2-Dioxygenase Reductase. | Ferredoxin:Oxidoreductase FAD/NAD(P)-binding. | 0.497 |
| benC | ACO80844.1 | Avin_08610 | Avin_47390 | Benzoate 1,2-Dioxygenase Reductase. | Oxidoreductase protein. | 0.540 |
| benC | hmp | Avin_08610 | Avin_51090 | Benzoate 1,2-Dioxygenase Reductase. | Flavohemoglobin Hmp; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily. | 0.589 |
| benC | nasB | Avin_08610 | Avin_23350 | Benzoate 1,2-Dioxygenase Reductase. | Assimilatory nitrate reductase, NasB; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.451 |
| cooS | ACO76704.1 | Avin_04490 | Avin_04480 | Carbon-monoxide dehydrogenase, catalytic subunit. | FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | 0.946 |
| cooS | hmp | Avin_04490 | Avin_51090 | Carbon-monoxide dehydrogenase, catalytic subunit. | Flavohemoglobin Hmp; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily. | 0.922 |
| cooS | nasA | Avin_04490 | Avin_23370 | Carbon-monoxide dehydrogenase, catalytic subunit. | Assimilatory Nitrite reductase,large subunit; NasA; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.683 |
| hmp | ACO76704.1 | Avin_51090 | Avin_04480 | Flavohemoglobin Hmp; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily. | FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | 0.753 |
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