Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Nham_0594 | Nham_0827 | Nham_0594 | Nham_0827 | Hypothetical protein. | AAA ATPase, central region. | 0.626 |
Nham_0594 | Nham_2245 | Nham_0594 | Nham_2245 | Hypothetical protein. | Major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.445 |
Nham_0594 | Nham_3749 | Nham_0594 | Nham_3749 | Hypothetical protein. | AAA ATPase, central region. | 0.626 |
Nham_0594 | alaS | Nham_0594 | Nham_1621 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.465 |
Nham_0594 | aqpZ | Nham_0594 | Nham_1234 | Hypothetical protein. | MIP family channel protein; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.445 |
Nham_0594 | glpK | Nham_0594 | Nham_0360 | Hypothetical protein. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.847 |
Nham_0827 | Nham_0594 | Nham_0827 | Nham_0594 | AAA ATPase, central region. | Hypothetical protein. | 0.626 |
Nham_0827 | glpK | Nham_0827 | Nham_0360 | AAA ATPase, central region. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.636 |
Nham_1090 | Nham_2245 | Nham_1090 | Nham_2245 | Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.803 |
Nham_1090 | Nham_2449 | Nham_1090 | Nham_2449 | Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Glycerophosphoryl diester phosphodiesterase. | 0.745 |
Nham_1090 | aqpZ | Nham_1090 | Nham_1234 | Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | MIP family channel protein; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.803 |
Nham_1090 | glpK | Nham_1090 | Nham_0360 | Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.998 |
Nham_1090 | plsY | Nham_1090 | Nham_2284 | Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.918 |
Nham_1708 | glpK | Nham_1708 | Nham_0360 | Citrate synthase; Belongs to the citrate synthase family. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.704 |
Nham_2245 | Nham_0594 | Nham_2245 | Nham_0594 | Major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Hypothetical protein. | 0.445 |
Nham_2245 | Nham_1090 | Nham_2245 | Nham_1090 | Major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.803 |
Nham_2245 | Nham_2449 | Nham_2245 | Nham_2449 | Major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Glycerophosphoryl diester phosphodiesterase. | 0.595 |
Nham_2245 | aqpZ | Nham_2245 | Nham_1234 | Major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | MIP family channel protein; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.423 |
Nham_2245 | glpK | Nham_2245 | Nham_0360 | Major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.847 |
Nham_2449 | Nham_1090 | Nham_2449 | Nham_1090 | Glycerophosphoryl diester phosphodiesterase. | Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.745 |
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