STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nham_0803DNA methylase N-4/N-6; Belongs to the N(4)/N(6)-methyltransferase family. (436 aa)    
Predicted Functional Partners:
Nham_0802
Hypothetical protein.
 
     0.940
Nham_0801
Phage uncharacterized protein-like protein.
 
    0.911
Nham_0797
Conserved hypothetical protein.
 
    0.824
Nham_0796
Resolvase-like protein.
 
    0.820
Nham_0798
Conserved hypothetical protein.
 
 
 
 0.815
Nham_0815
Hypothetical protein.
 
     0.794
rsmG
Methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.786
Nham_1146
Putative bacteriophage-related protein.
 
    0.773
Nham_1145
Recombinase.
 
    0.772
Nham_0838
Conserved hypothetical protein.
  
 
 
 0.768
Your Current Organism:
Nitrobacter hamburgensis
NCBI taxonomy Id: 323097
Other names: N. hamburgensis X14, Nitrobacter hamburgensis X14, Nitrobacter hamburgensis str. X14, Nitrobacter hamburgensis strain X14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.