STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nham_1080Methyl-accepting chemotaxis sensory transducer. (698 aa)    
Predicted Functional Partners:
Nham_3376
CheA signal transduction histidine kinase.
 
 
 0.998
Nham_3375
CheW protein.
 
 
 0.976
Nham_3989
Hypothetical protein.
  
 
 0.939
Nham_0080
Putative PAS/PAC sensor protein.
 
 0.937
Nham_3990
MCP methyltransferase, CheR-type.
 
 
 0.910
Nham_3372
MCP methyltransferase, CheR-type.
 
 
 0.884
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.869
Nham_3160
Response regulator receiver domain protein (CheY-like).
 
 
 0.721
Nham_1495
MotA/TolQ/ExbB proton channel.
 
  
 0.673
Nham_0235
PAS/PAC sensor hybrid histidine kinase.
  
 
 0.649
Your Current Organism:
Nitrobacter hamburgensis
NCBI taxonomy Id: 323097
Other names: N. hamburgensis X14, Nitrobacter hamburgensis X14, Nitrobacter hamburgensis str. X14, Nitrobacter hamburgensis strain X14
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