STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nham_1981Metallophosphoesterase. (281 aa)    
Predicted Functional Partners:
Nham_1980
Hypothetical protein.
       0.762
Nham_0594
Hypothetical protein.
    
 
 0.644
Nham_1979
AAA ATPase, central region.
       0.569
Nham_1978
Hypothetical protein.
       0.555
Nham_0971
Conserved hypothetical protein.
  
     0.520
Nham_1977
Hypothetical protein.
       0.500
Nham_2280
Abortive infection protein.
  
     0.492
Nham_1976
Hypothetical protein.
       0.434
Nham_2809
Branched-chain amino acid transport system permease protein; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
     0.413
Your Current Organism:
Nitrobacter hamburgensis
NCBI taxonomy Id: 323097
Other names: N. hamburgensis X14, Nitrobacter hamburgensis X14, Nitrobacter hamburgensis str. X14, Nitrobacter hamburgensis strain X14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.