STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nham_2167Peroxidase. (219 aa)    
Predicted Functional Partners:
Nham_3732
Alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.874
Nham_0413
Periplasmic protein thiol.
  
 0.811
Nham_1023
Putative signal peptide protein.
  
 0.811
Nham_3478
Thioredoxin-like protein.
  
 0.811
Nham_1321
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.762
Nham_2880
Thioredoxin reductase.
  
 
 0.762
tal
Transaldolase / glucose-6-phosphate isomerase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.717
Nham_0804
Catalase; Belongs to the catalase family.
   
 
 0.640
Nham_0843
Catalase.
   
 
 0.640
Nham_0854
Catalase-like protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
 
 0.640
Your Current Organism:
Nitrobacter hamburgensis
NCBI taxonomy Id: 323097
Other names: N. hamburgensis X14, Nitrobacter hamburgensis X14, Nitrobacter hamburgensis str. X14, Nitrobacter hamburgensis strain X14
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