STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nham_2192Signal transduction histidine kinase. (362 aa)    
Predicted Functional Partners:
Nham_2190
Multi-sensor signal transduction histidine kinase.
 
  
 0.973
Nham_2191
Response regulator receiver domain protein (CheY-like).
 
 
 0.957
Nham_3989
Hypothetical protein.
  
 
 0.838
Nham_3376
CheA signal transduction histidine kinase.
  
 
 0.837
Nham_2177
Multi-sensor signal transduction histidine kinase.
 
 
 
 0.773
Nham_3990
MCP methyltransferase, CheR-type.
 
  
 0.739
Nham_0235
PAS/PAC sensor hybrid histidine kinase.
 
 0.716
Nham_3488
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.711
Nham_2623
Multi-sensor signal transduction histidine kinase.
 
 
 
 0.664
Nham_3570
Sigma-24 (FecI-like).
 
   
 0.648
Your Current Organism:
Nitrobacter hamburgensis
NCBI taxonomy Id: 323097
Other names: N. hamburgensis X14, Nitrobacter hamburgensis X14, Nitrobacter hamburgensis str. X14, Nitrobacter hamburgensis strain X14
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