STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nham_2297Conserved hypothetical protein. (355 aa)    
Predicted Functional Partners:
Nham_2630
Conserved hypothetical protein.
  
     0.755
Nham_3879
Conserved hypothetical protein.
  
     0.690
Nham_2921
Conserved hypothetical protein.
  
     0.682
Nham_1018
Tyrosinase.
  
     0.681
Nham_4001
Phosphoesterase, PA-phosphatase related protein.
  
     0.669
Nham_0884
Histidine kinase.
  
     0.631
Nham_0403
Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
  
    0.593
Nham_2303
Peptidase M23B.
  
     0.588
Nham_2987
Transcriptional regulator, AraC family.
  
     0.584
Nham_2298
Conserved hypothetical protein.
  
    0.581
Your Current Organism:
Nitrobacter hamburgensis
NCBI taxonomy Id: 323097
Other names: N. hamburgensis X14, Nitrobacter hamburgensis X14, Nitrobacter hamburgensis str. X14, Nitrobacter hamburgensis strain X14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.