STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nham_2385Conserved hypothetical protein. (261 aa)    
Predicted Functional Partners:
Nham_2384
Phage-related baseplate assembly protein V.
       0.783
Nham_2386
Conserved hypothetical protein.
       0.780
Nham_2387
Conserved hypothetical protein.
       0.638
Nham_2382
Baseplate J-like protein.
       0.464
Nham_2383
GPW/gp25.
       0.464
Nham_2381
Phage tail protein I.
       0.463
Nham_2380
Phage-related tail fibre protein-like protein.
       0.457
Nham_2388
Conserved hypothetical protein.
       0.457
Nham_2391
Phage portal protein, lambda.
       0.446
Nham_2379
Hypothetical protein.
       0.440
Your Current Organism:
Nitrobacter hamburgensis
NCBI taxonomy Id: 323097
Other names: N. hamburgensis X14, Nitrobacter hamburgensis X14, Nitrobacter hamburgensis str. X14, Nitrobacter hamburgensis strain X14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.