STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nham_2575Carbonic anhydrase/acetyltransferase isoleucine patch superfamily. (176 aa)    
Predicted Functional Partners:
cbbL1
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
    
 
 0.863
Nham_3750
Ribulose 1,5-bisphosphate carboxylase small subunit.
    
 
 0.812
Nham_0361
Carbonic anhydrase.
    
 
 0.741
Nham_3592
Carbonate dehydratase.
    
 
 0.741
Nham_0910
Carbonic anhydrase.
    
 
 0.739
Nham_2576
Conserved hypothetical protein.
       0.690
Nham_4018
Dihydroorotase, multifunctional complex type.
  
    0.525
Nham_2577
Conserved hypothetical protein.
       0.507
Nham_2574
Conserved hypothetical protein.
       0.488
Nham_0934
Phenylacetic acid degradation protein paaN.
     
 0.469
Your Current Organism:
Nitrobacter hamburgensis
NCBI taxonomy Id: 323097
Other names: N. hamburgensis X14, Nitrobacter hamburgensis X14, Nitrobacter hamburgensis str. X14, Nitrobacter hamburgensis strain X14
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.