STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nwi_0019Transcriptional regulator, XRE family. (139 aa)    
Predicted Functional Partners:
trmB
Putative methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
     
 0.748
Nwi_0093
DNA polymerase III, delta subunit.
  
     0.709
Nwi_1403
SmpA/OmlA.
  
     0.639
Nwi_2517
Signal transduction histidine kinase.
  
     0.637
Nwi_2628
Double-transmembrane region.
  
     0.635
Nwi_2629
Conserved hypothetical protein.
  
     0.621
Nwi_0573
Conserved hypothetical protein.
  
     0.617
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
    0.611
Nwi_2690
Protein of unknown function DUF1013.
  
     0.540
Nwi_0374
Conserved hypothetical protein.
  
     0.531
Your Current Organism:
Nitrobacter winogradskyi
NCBI taxonomy Id: 323098
Other names: N. winogradskyi Nb-255, Nitrobacter winogradskyi Nb-255, Nitrobacter winogradskyi str. Nb-255, Nitrobacter winogradskyi strain Nb-255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.