STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nwi_0331Perplasmic binding protein of ABC transporter. (344 aa)    
Predicted Functional Partners:
Nwi_0333
Binding-protein-dependent transport systems inner membrane component.
 
    0.962
Nwi_0332
ABC transporter, ATPase subunit.
 
    0.949
Nwi_0330
Creatininase.
 
     0.782
Nwi_0334
Conserved hypothetical protein.
       0.749
Nwi_0683
Binding-protein-dependent transport systems inner membrane component.
 
  
 0.567
Nwi_2680
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components.
  
     0.548
cysC
Sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
  
  
 0.546
Nwi_0673
Binding-protein-dependent transport systems inner membrane component.
 
  
 0.545
Nwi_2762
uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
  
  
 0.502
Nwi_0456
Binding-protein-dependent transport systems inner membrane component.
 
    0.494
Your Current Organism:
Nitrobacter winogradskyi
NCBI taxonomy Id: 323098
Other names: N. winogradskyi Nb-255, Nitrobacter winogradskyi Nb-255, Nitrobacter winogradskyi str. Nb-255, Nitrobacter winogradskyi strain Nb-255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.