Nwi_1007 protein (Nitrobacter winogradskyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Nwi_1007

Binding-protein-dependent transport systems inner membrane component. (304 aa)

Predicted Functional Partners:

potA

0.999

Nwi_1008

0.999

Nwi_1241

0.996

Nwi_1098

0.481

Nwi_2378

0.457

cysA

0.423

Your Current Organism:

Nitrobacter winogradskyi

NCBI taxonomy Id: 323098
Other names: N. winogradskyi Nb-255, Nitrobacter winogradskyi Nb-255, Nitrobacter winogradskyi str. Nb-255, Nitrobacter winogradskyi strain Nb-255

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Nwi_1007	Nwi_1008	Nwi_1007	Nwi_1008	Binding-protein-dependent transport systems inner membrane component.	Binding-protein-dependent transport systems inner membrane component.	0.999
Nwi_1007	Nwi_1098	Nwi_1007	Nwi_1098	Binding-protein-dependent transport systems inner membrane component.	FAD dependent oxidoreductase.	0.481
Nwi_1007	Nwi_1241	Nwi_1007	Nwi_1241	Binding-protein-dependent transport systems inner membrane component.	Extracellular solute-binding protein, family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.996
Nwi_1007	Nwi_2378	Nwi_1007	Nwi_2378	Binding-protein-dependent transport systems inner membrane component.	Methionine adenosyltransferase; Belongs to the AdoMet synthase family.	0.457
Nwi_1007	cysA	Nwi_1007	Nwi_2757	Binding-protein-dependent transport systems inner membrane component.	Sulphate transport system permease protein 1; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.	0.423
Nwi_1007	potA	Nwi_1007	Nwi_1006	Binding-protein-dependent transport systems inner membrane component.	Spermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.999
Nwi_1008	Nwi_1007	Nwi_1008	Nwi_1007	Binding-protein-dependent transport systems inner membrane component.	Binding-protein-dependent transport systems inner membrane component.	0.999
Nwi_1008	Nwi_1098	Nwi_1008	Nwi_1098	Binding-protein-dependent transport systems inner membrane component.	FAD dependent oxidoreductase.	0.476
Nwi_1008	Nwi_1241	Nwi_1008	Nwi_1241	Binding-protein-dependent transport systems inner membrane component.	Extracellular solute-binding protein, family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.999
Nwi_1008	cysA	Nwi_1008	Nwi_2757	Binding-protein-dependent transport systems inner membrane component.	Sulphate transport system permease protein 1; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.	0.481
Nwi_1008	potA	Nwi_1008	Nwi_1006	Binding-protein-dependent transport systems inner membrane component.	Spermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.999
Nwi_1098	Nwi_1007	Nwi_1098	Nwi_1007	FAD dependent oxidoreductase.	Binding-protein-dependent transport systems inner membrane component.	0.481
Nwi_1098	Nwi_1008	Nwi_1098	Nwi_1008	FAD dependent oxidoreductase.	Binding-protein-dependent transport systems inner membrane component.	0.476
Nwi_1098	Nwi_1241	Nwi_1098	Nwi_1241	FAD dependent oxidoreductase.	Extracellular solute-binding protein, family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.570
Nwi_1241	Nwi_1007	Nwi_1241	Nwi_1007	Extracellular solute-binding protein, family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Binding-protein-dependent transport systems inner membrane component.	0.996
Nwi_1241	Nwi_1008	Nwi_1241	Nwi_1008	Extracellular solute-binding protein, family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Binding-protein-dependent transport systems inner membrane component.	0.999
Nwi_1241	Nwi_1098	Nwi_1241	Nwi_1098	Extracellular solute-binding protein, family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	FAD dependent oxidoreductase.	0.570
Nwi_1241	potA	Nwi_1241	Nwi_1006	Extracellular solute-binding protein, family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Spermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.995
Nwi_2378	Nwi_1007	Nwi_2378	Nwi_1007	Methionine adenosyltransferase; Belongs to the AdoMet synthase family.	Binding-protein-dependent transport systems inner membrane component.	0.457
cysA	Nwi_1007	Nwi_2757	Nwi_1007	Sulphate transport system permease protein 1; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.	Binding-protein-dependent transport systems inner membrane component.	0.423

page 1 of 2

Server load: high (88%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About