Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Nwi_1237OmpA/MotB. (276 aa)    
Predicted Functional Partners:
Nwi_1236
MotA/TolQ/ExbB proton channel.
 
 0.999
Nwi_1100
Protein of unknown function DUF1078; Belongs to the flagella basal body rod proteins family.
 
  
 0.981
Nwi_0520
CheA kinase.
 
  
 0.966
Nwi_0521
CheW protein.
 
  
 0.952
Nwi_0599
Flagellar FliF M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.944
Nwi_1099
Flagellar basal body rod protein, FlaE.
 
  
 0.941
Nwi_0601
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.927
Nwi_1124
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.925
Nwi_0598
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.923
Nwi_0524
MCP methyltransferase, CheR-type.
 
  
 0.918
Your Current Organism:
Nitrobacter winogradskyi
NCBI taxonomy Id: 323098
Other names: N. winogradskyi Nb-255, Nitrobacter winogradskyi Nb-255, Nitrobacter winogradskyi str. Nb-255, Nitrobacter winogradskyi strain Nb-255
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