Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Nwi_1663FeS assembly ATPase SufC. (249 aa)    
Predicted Functional Partners:
Nwi_1662
Iron-regulated ABC transporter permease protein SufD.
 
 
 0.999
Nwi_1664
Iron-regulated ABC transporter membrane component SufB.
 
 0.999
Nwi_1661
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
  
 0.991
Nwi_1328
Nitrogen-fixing NifU-like protein.
 
  
 0.944
Nwi_1660
Protein of unknown function DUF59.
 
  
 0.858
Nwi_1659
HesB/YadR/YfhF; Belongs to the HesB/IscA family.
  
 
 0.819
Nwi_0711
Protein of unknown function DUF59.
 
  
 0.801
Nwi_2223
Cysteine desulfuration protein SufE.
 
 
 0.777
Nwi_1665
Cysteine sulfinate desulfinase/cysteine desulfurase.
  
  
 0.682
tal
Transaldolase / glucose-6-phosphate isomerase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
     
 0.556
Your Current Organism:
Nitrobacter winogradskyi
NCBI taxonomy Id: 323098
Other names: N. winogradskyi Nb-255, Nitrobacter winogradskyi Nb-255, Nitrobacter winogradskyi str. Nb-255, Nitrobacter winogradskyi strain Nb-255
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