STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mhun_0103Putative flagellar protein FlaH. (256 aa)    
Predicted Functional Partners:
Mhun_0104
Type II secretion system protein E.
 
  
 0.983
Mhun_0105
Type II secretion system protein.
  
  
 0.930
Mhun_0101
Conserved hypothetical protein.
  
  
 0.873
Mhun_0102
Hypothetical protein.
  
  
 0.838
Mhun_3170
Type II secretion system protein E.
 
  
 0.829
Mhun_1172
Type II secretion system protein E.
 
  
 0.818
Mhun_0314
Type II secretion system protein E.
 
  
 0.800
Mhun_0106
Hypothetical protein.
       0.784
Mhun_0110
CheA signal transduction histidine kinases.
  
  
 0.728
Mhun_0107
Conserved hypothetical protein.
       0.723
Your Current Organism:
Methanospirillum hungatei
NCBI taxonomy Id: 323259
Other names: M. hungatei JF-1, Methanospirillum hungatei DSM 864, Methanospirillum hungatei JF-1, Methanospirillum hungatei NBRC 100397, Methanospirillum hungatei str. JF-1, Methanospirillum hungatei strain JF-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.