STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mhun_0272Mg-chelatase subunit ChlI-like protein. (106 aa)    
Predicted Functional Partners:
Mhun_0275
Protoporphyrin IX magnesium-chelatase.
 
     0.968
Mhun_0292
Cobaltochelatase CobN subunit.
 
  
 0.896
Mhun_2727
Von Willebrand factor, type A.
  
 
 0.894
Mhun_0282
Cobaltochelatase CobN subunit.
 
  
 0.893
Mhun_0603
Von Willebrand factor, type A.
  
 
 0.893
Mhun_0271
Protein of unknown function DUF105.
 
     0.836
Mhun_0276
Protoporphyrin IX magnesium-chelatase.
 
     0.813
Mhun_2065
FAD dependent oxidoreductase.
 
  
 0.718
Mhun_0625
Geranylgeranylglycerol-phosphate geranylgeranyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids.
 
  
 0.673
Mhun_0810
Geranylgeranyl reductase.
 
  
 0.637
Your Current Organism:
Methanospirillum hungatei
NCBI taxonomy Id: 323259
Other names: M. hungatei JF-1, Methanospirillum hungatei DSM 864, Methanospirillum hungatei JF-1, Methanospirillum hungatei NBRC 100397, Methanospirillum hungatei str. JF-1, Methanospirillum hungatei strain JF-1
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