STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mhun_1326Conserved hypothetical protein. (139 aa)    
Predicted Functional Partners:
Mhun_1325
CoA enzyme activase.
       0.701
Mhun_0864
Permease.
  
  
 0.659
Mhun_0862
Permease.
 
  
 0.652
Mhun_0795
Beta-lactamase-like protein.
   
  
 0.608
Mhun_1554
Beta-lactamase-like protein.
   
  
 0.608
Mhun_0830
Phosphopantothenate-cysteine ligase / Phosphopantothenoylcysteine decarboxylase.
  
    0.565
Mhun_1329
Formylmethanofuran dehydrogenase, subunit E.
 
     0.501
Mhun_1327
Transcriptional regulator, PadR family.
       0.448
Mhun_2516
Hypothetical protein.
  
     0.437
Mhun_2765
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
  
     0.431
Your Current Organism:
Methanospirillum hungatei
NCBI taxonomy Id: 323259
Other names: M. hungatei JF-1, Methanospirillum hungatei DSM 864, Methanospirillum hungatei JF-1, Methanospirillum hungatei NBRC 100397, Methanospirillum hungatei str. JF-1, Methanospirillum hungatei strain JF-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.