Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mhun_2265 | Mhun_2286 | Mhun_2265 | Mhun_2286 | rRNA biogenesis protein Nop56/Nop58. | Hypothetical protein. | 0.899 |
Mhun_2265 | Mhun_2933 | Mhun_2265 | Mhun_2933 | rRNA biogenesis protein Nop56/Nop58. | GTP-binding protein, HSR1-related protein. | 0.987 |
Mhun_2265 | eif6 | Mhun_2265 | Mhun_3020 | rRNA biogenesis protein Nop56/Nop58. | Translation initiation factor 6 (aeIF-6); Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex. | 0.948 |
Mhun_2265 | rlmE | Mhun_2265 | Mhun_1487 | rRNA biogenesis protein Nop56/Nop58. | 23S rRNA Um-2552 2'-O-methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.991 |
Mhun_2265 | rpl10 | Mhun_2265 | Mhun_0655 | rRNA biogenesis protein Nop56/Nop58. | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.955 |
Mhun_2265 | rpl24 | Mhun_2265 | Mhun_2242 | rRNA biogenesis protein Nop56/Nop58. | LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.818 |
Mhun_2265 | rpl3 | Mhun_2265 | Mhun_2253 | rRNA biogenesis protein Nop56/Nop58. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.840 |
Mhun_2265 | rpl30 | Mhun_2265 | Mhun_2232 | rRNA biogenesis protein Nop56/Nop58. | LSU ribosomal protein L30P. | 0.843 |
Mhun_2265 | rpl7ae | Mhun_2265 | Mhun_1601 | rRNA biogenesis protein Nop56/Nop58. | LSU ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.999 |
Mhun_2265 | rps8e | Mhun_2265 | Mhun_2485 | rRNA biogenesis protein Nop56/Nop58. | SSU ribosomal protein S8E. | 0.960 |
Mhun_2286 | Mhun_2265 | Mhun_2286 | Mhun_2265 | Hypothetical protein. | rRNA biogenesis protein Nop56/Nop58. | 0.899 |
Mhun_2286 | Mhun_2933 | Mhun_2286 | Mhun_2933 | Hypothetical protein. | GTP-binding protein, HSR1-related protein. | 0.981 |
Mhun_2286 | eif6 | Mhun_2286 | Mhun_3020 | Hypothetical protein. | Translation initiation factor 6 (aeIF-6); Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex. | 0.950 |
Mhun_2286 | rlmE | Mhun_2286 | Mhun_1487 | Hypothetical protein. | 23S rRNA Um-2552 2'-O-methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.959 |
Mhun_2286 | rpl10 | Mhun_2286 | Mhun_0655 | Hypothetical protein. | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.974 |
Mhun_2286 | rpl24 | Mhun_2286 | Mhun_2242 | Hypothetical protein. | LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.931 |
Mhun_2286 | rpl3 | Mhun_2286 | Mhun_2253 | Hypothetical protein. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.940 |
Mhun_2286 | rpl30 | Mhun_2286 | Mhun_2232 | Hypothetical protein. | LSU ribosomal protein L30P. | 0.981 |
Mhun_2286 | rpl7ae | Mhun_2286 | Mhun_1601 | Hypothetical protein. | LSU ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.959 |
Mhun_2286 | rps8e | Mhun_2286 | Mhun_2485 | Hypothetical protein. | SSU ribosomal protein S8E. | 0.979 |
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