STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mhun_1717Phosphoesterase, RecJ-like protein. (612 aa)    
Predicted Functional Partners:
Mhun_0667
Conserved hypothetical protein.
  
    0.688
cofC
Phospholactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family.
  
     0.679
Mhun_2503
DEAD/DEAH box helicase-like protein.
  
    0.673
Mhun_1714
Conserved hypothetical protein.
 
     0.638
secF
Protein translocase subunit secF; Involved in protein export.
 
     0.606
Mhun_1587
Protein of unknown function UPF0153.
  
    0.585
Mhun_0828
NMD3.
  
     0.584
Mhun_0973
Phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
     0.582
Mhun_2616
Conserved hypothetical protein.
  
     0.576
Mhun_1718
Conserved hypothetical protein.
       0.571
Your Current Organism:
Methanospirillum hungatei
NCBI taxonomy Id: 323259
Other names: M. hungatei JF-1, Methanospirillum hungatei DSM 864, Methanospirillum hungatei JF-1, Methanospirillum hungatei NBRC 100397, Methanospirillum hungatei str. JF-1, Methanospirillum hungatei strain JF-1
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