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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mhun_2000Radical SAM. (565 aa)    
Predicted Functional Partners:
Mhun_1996
Generic methyltransferase.
 
    0.883
Mhun_0253
Transcriptional regulator, MarR family.
  
    0.753
Mhun_1999
Periplasmic binding protein.
  
    0.748
Mhun_0171
Iron-containing alcohol dehydrogenase.
  
  
 0.736
Mhun_1122
AMMECR1.
     0.725
Mhun_2891
Protein of unknown function DUF52; Belongs to the MEMO1 family.
     0.699
Mhun_1737
Nitrite and sulphite reductase 4Fe-4S region.
  
  
 0.656
Mhun_1995
Periplasmic binding protein.
 
     0.531
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
  
 0.516
Mhun_0653
Type I phosphodiesterase/nucleotide pyrophosphatase.
  
  
 0.510
Your Current Organism:
Methanospirillum hungatei
NCBI taxonomy Id: 323259
Other names: M. hungatei JF-1, Methanospirillum hungatei DSM 864, Methanospirillum hungatei JF-1, Methanospirillum hungatei NBRC 100397, Methanospirillum hungatei str. JF-1, Methanospirillum hungatei strain JF-1
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