STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mhun_2161HTH DNA-binding protein. (119 aa)    
Predicted Functional Partners:
Mhun_2159
Dinitrogenase iron-molybdenum cofactor biosynthesis.
 
  
 0.931
Mhun_2164
Dinitrogenase iron-molybdenum cofactor biosynthesis.
 
  
 0.882
Mhun_2311
ABC transporter related protein.
  
    0.855
Mhun_2163
Cobyrinic acid a,c-diamide synthase.
 
     0.837
Mhun_2162
Cobyrinic acid a,c-diamide synthase.
 
     0.835
Mhun_2160
Hypothetical protein.
       0.668
Mhun_2165
ATP-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
    0.488
Mhun_2158
FeoA.
     
 0.471
Mhun_1616
Protein of unknown function DUF89.
 
     0.431
Mhun_1960
Beta-lactamase-like protein.
 
     0.430
Your Current Organism:
Methanospirillum hungatei
NCBI taxonomy Id: 323259
Other names: M. hungatei JF-1, Methanospirillum hungatei DSM 864, Methanospirillum hungatei JF-1, Methanospirillum hungatei NBRC 100397, Methanospirillum hungatei str. JF-1, Methanospirillum hungatei strain JF-1
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