STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mhun_2380Hypothetical protein. (358 aa)    
Predicted Functional Partners:
gap
Glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.670
Mhun_1836
CoB--CoM heterodisulfide reductase subunit C.
  
 
 0.630
Mhun_1837
CoB--CoM heterodisulfide reductase subunit B.
  
 
 0.628
Mhun_2332
Coenzyme F420-reducing hydrogenase, alpha subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
  
 
 0.607
Mhun_2381
Hypothetical protein.
  
    0.597
Mhun_2382
Hypothetical protein.
  
    0.586
Mhun_3072
dTDP-glucose 4,6-dehydratase.
  
    0.528
Mhun_3100
dTDP-glucose 4,6-dehydratase.
  
    0.528
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
  
 0.511
Mhun_0077
Inosine-guanosine kinase / cytidine kinase; Belongs to the carbohydrate kinase PfkB family.
   
 
 0.484
Your Current Organism:
Methanospirillum hungatei
NCBI taxonomy Id: 323259
Other names: M. hungatei JF-1, Methanospirillum hungatei DSM 864, Methanospirillum hungatei JF-1, Methanospirillum hungatei NBRC 100397, Methanospirillum hungatei str. JF-1, Methanospirillum hungatei strain JF-1
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