STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mhun_3159Acyl carrier protein. (76 aa)    
Predicted Functional Partners:
Mhun_3156
Acyl protein synthase/acyl-CoA reductase RfbN.
 
     0.932
Mhun_3157
Acyl-protein synthetase, LuxE.
 
     0.932
Mhun_3158
AMP-dependent synthetase and ligase.
 
     0.836
Mhun_3160
Phosphopantetheine--protein transferase domain.
       0.785
Mhun_3155
3-oxoacyl-[acyl-carrier-protein] reductase.
       0.775
Mhun_3154
Conserved hypothetical protein.
       0.717
Mhun_3112
Acyl-protein synthetase, LuxE.
 
     0.714
Mhun_3113
Acyl protein synthase/acyl-CoA reductase RfbN.
 
     0.711
Mhun_3161
Glycosyl transferase, family 2.
       0.671
Mhun_3162
Conserved hypothetical protein; Belongs to the acylphosphatase family.
       0.410
Your Current Organism:
Methanospirillum hungatei
NCBI taxonomy Id: 323259
Other names: M. hungatei JF-1, Methanospirillum hungatei DSM 864, Methanospirillum hungatei JF-1, Methanospirillum hungatei NBRC 100397, Methanospirillum hungatei str. JF-1, Methanospirillum hungatei strain JF-1
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