Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noc_0164High-affinity Fe2+/Pb2+ permease. (653 aa)    
Predicted Functional Partners:
Noc_3047
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 
 0.819
Noc_1240
Quinol:cytochrome c oxidoreductase membrane protein.
   
 
 0.722
Noc_1241
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit.
   
 
 0.722
Noc_1610
Hypothetical protein.
   
 
 0.722
Noc_1798
Conserved hypothetical protein.
   
 
 0.722
Noc_1850
Nitric oxide reductase, NorC subunit apoprotein.
   
 
 0.722
Noc_1898
Conserved hypothetical protein.
   
 
 0.722
Noc_2408
Cytochrome c, class I.
   
 
 0.722
Noc_1800
Hypothetical protein.
   
 
 0.648
Noc_2063
Hypothetical protein.
   
 
 0.648
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
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