Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Noc_0174 | Noc_0255 | Noc_0174 | Noc_0255 | Chorismate mutase. | Aminodeoxychorismate synthase, subunit I. | 0.911 |
Noc_0174 | Noc_1662 | Noc_0174 | Noc_1662 | Chorismate mutase. | Aminodeoxychorismate lyase apoprotein. | 0.501 |
Noc_0174 | Noc_2495 | Noc_0174 | Noc_2495 | Chorismate mutase. | Anthranilate synthase, component II. | 0.970 |
Noc_0174 | aroC | Noc_0174 | Noc_2938 | Chorismate mutase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.994 |
Noc_0174 | trpA | Noc_0174 | Noc_1021 | Chorismate mutase. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.744 |
Noc_0174 | trpB | Noc_0174 | Noc_1020 | Chorismate mutase. | Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.573 |
Noc_0174 | trpC | Noc_0174 | Noc_2497 | Chorismate mutase. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.770 |
Noc_0174 | trpD | Noc_0174 | Noc_2496 | Chorismate mutase. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.778 |
Noc_0174 | trpF | Noc_0174 | Noc_1019 | Chorismate mutase. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.916 |
Noc_0254 | Noc_0255 | Noc_0254 | Noc_0255 | Amino acid kinase family protein. | Aminodeoxychorismate synthase, subunit I. | 0.838 |
Noc_0255 | Noc_0174 | Noc_0255 | Noc_0174 | Aminodeoxychorismate synthase, subunit I. | Chorismate mutase. | 0.911 |
Noc_0255 | Noc_0254 | Noc_0255 | Noc_0254 | Aminodeoxychorismate synthase, subunit I. | Amino acid kinase family protein. | 0.838 |
Noc_0255 | Noc_1662 | Noc_0255 | Noc_1662 | Aminodeoxychorismate synthase, subunit I. | Aminodeoxychorismate lyase apoprotein. | 0.958 |
Noc_0255 | Noc_2495 | Noc_0255 | Noc_2495 | Aminodeoxychorismate synthase, subunit I. | Anthranilate synthase, component II. | 0.999 |
Noc_0255 | aroC | Noc_0255 | Noc_2938 | Aminodeoxychorismate synthase, subunit I. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.917 |
Noc_0255 | trpA | Noc_0255 | Noc_1021 | Aminodeoxychorismate synthase, subunit I. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.948 |
Noc_0255 | trpB | Noc_0255 | Noc_1020 | Aminodeoxychorismate synthase, subunit I. | Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.913 |
Noc_0255 | trpC | Noc_0255 | Noc_2497 | Aminodeoxychorismate synthase, subunit I. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.994 |
Noc_0255 | trpD | Noc_0255 | Noc_2496 | Aminodeoxychorismate synthase, subunit I. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.996 |
Noc_0255 | trpF | Noc_0255 | Noc_1019 | Aminodeoxychorismate synthase, subunit I. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.995 |
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