STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noc_0345Thioredoxin reductase. (319 aa)    
Predicted Functional Partners:
Noc_2583
Thioredoxin; Belongs to the thioredoxin family.
 
 0.996
Noc_0878
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
  
 
 0.975
Noc_0603
Thioredoxin domain-containing protein.
 
 0.920
Noc_0842
Cystathionine gamma-synthase.
   
 
 0.913
Noc_1307
1-Cys peroxiredoxin.
  
 
 0.906
Noc_2487
L-selenocysteine selenide-lyase (L-alanine-forming) / cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
 0.905
Noc_1165
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.893
Noc_0327
Possible signal peptide protein.
  
 
 0.830
Noc_0942
Periplasmic protein thiol-disulfide oxidoreductase DsbE.
  
 
 0.830
Noc_0362
Adenylyltransferase.
  
  
 0.819
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
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