Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Noc_0628 | Noc_0629 | PilL protein. | Hypothetical protein. | 0.496 |
Noc_0628 | Noc_0630 | PilL protein. | Lytic transglycosylase, catalytic. | 0.485 |
Noc_0628 | Noc_0631 | PilL protein. | Conserved hypothetical protein. | 0.485 |
Noc_0628 | Noc_0632 | PilL protein. | Conserved hypothetical protein. | 0.477 |
Noc_0628 | Noc_0633 | PilL protein. | Conserved hypothetical protein. | 0.477 |
Noc_0629 | Noc_0628 | Hypothetical protein. | PilL protein. | 0.496 |
Noc_0629 | Noc_0630 | Hypothetical protein. | Lytic transglycosylase, catalytic. | 0.764 |
Noc_0629 | Noc_0631 | Hypothetical protein. | Conserved hypothetical protein. | 0.764 |
Noc_0629 | Noc_0632 | Hypothetical protein. | Conserved hypothetical protein. | 0.745 |
Noc_0629 | Noc_0633 | Hypothetical protein. | Conserved hypothetical protein. | 0.745 |
Noc_0629 | Noc_0634 | Hypothetical protein. | Conserved hypothetical protein. | 0.516 |
Noc_0629 | Noc_0635 | Hypothetical protein. | Conserved hypothetical protein. | 0.516 |
Noc_0629 | Noc_0636 | Hypothetical protein. | Exonuclease. | 0.519 |
Noc_0630 | Noc_0628 | Lytic transglycosylase, catalytic. | PilL protein. | 0.485 |
Noc_0630 | Noc_0629 | Lytic transglycosylase, catalytic. | Hypothetical protein. | 0.764 |
Noc_0630 | Noc_0631 | Lytic transglycosylase, catalytic. | Conserved hypothetical protein. | 0.789 |
Noc_0630 | Noc_0632 | Lytic transglycosylase, catalytic. | Conserved hypothetical protein. | 0.950 |
Noc_0630 | Noc_0633 | Lytic transglycosylase, catalytic. | Conserved hypothetical protein. | 0.769 |
Noc_0630 | Noc_0634 | Lytic transglycosylase, catalytic. | Conserved hypothetical protein. | 0.605 |
Noc_0630 | Noc_0635 | Lytic transglycosylase, catalytic. | Conserved hypothetical protein. | 0.648 |
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