STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noc_0721Conserved hypothetical protein. (75 aa)    
Predicted Functional Partners:
Noc_0722
Signal transduction histidine kinase.
       0.789
Noc_0723
Two-component response regulator PilR.
       0.777
Noc_0720
GTP-binding protein TypA.
       0.773
Noc_1590
Hypothetical protein.
   
   0.765
Noc_2849
Rieske (2Fe-2S) protein.
   
   0.765
Noc_0719
Inositol-1(or 4)-monophosphatase.
       0.487
Noc_2373
Conserved hypothetical protein; Belongs to the flagella basal body rod proteins family.
    
   0.408
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.