STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noc_0733Hypothetical protein. (495 aa)    
Predicted Functional Partners:
Noc_0734
Sulfotransferase.
  
    0.778
Noc_0732
Glycosyl transferase, group 1.
 
     0.731
Noc_2094
Integrins alpha chain.
  
     0.655
Noc_1762
Integrins alpha chain.
  
     0.652
Noc_2092
Integrins alpha chain.
  
     0.649
Noc_2093
Integrins alpha chain.
  
     0.645
Noc_0731
ABC transporter, ATPase subunit.
  
    0.644
Noc_2091
Conserved hypothetical protein.
  
     0.623
Noc_0730
ABC-type polysaccharide/polyol phosphate export systems permease component-like protein.
       0.521
Noc_0728
Conserved hypothetical protein.
  
   0.497
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.