Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Noc_0588 | Noc_0738 | Noc_0588 | Noc_0738 | Glycosyl transferase, family 2. | Hypothetical protein. | 0.739 |
Noc_0623 | Noc_0738 | Noc_0623 | Noc_0738 | Plasmid segregation actin-type ATPase ParM. | Hypothetical protein. | 0.701 |
Noc_0623 | htpG | Noc_0623 | Noc_1718 | Plasmid segregation actin-type ATPase ParM. | Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity. | 0.988 |
Noc_0623 | rpoA | Noc_0623 | Noc_2300 | Plasmid segregation actin-type ATPase ParM. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.406 |
Noc_0715 | Noc_0738 | Noc_0715 | Noc_0738 | Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | Hypothetical protein. | 0.726 |
Noc_0738 | Noc_0588 | Noc_0738 | Noc_0588 | Hypothetical protein. | Glycosyl transferase, family 2. | 0.739 |
Noc_0738 | Noc_0623 | Noc_0738 | Noc_0623 | Hypothetical protein. | Plasmid segregation actin-type ATPase ParM. | 0.701 |
Noc_0738 | Noc_0715 | Noc_0738 | Noc_0715 | Hypothetical protein. | Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | 0.726 |
Noc_0738 | Noc_0739 | Noc_0738 | Noc_0739 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Noc_0738 | Noc_1032 | Noc_0738 | Noc_1032 | Hypothetical protein. | Hypothetical protein. | 0.861 |
Noc_0738 | Noc_2220 | Noc_0738 | Noc_2220 | Hypothetical protein. | Hypothetical protein. | 0.839 |
Noc_0738 | alaS | Noc_0738 | Noc_0926 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.842 |
Noc_0738 | htpG | Noc_0738 | Noc_1718 | Hypothetical protein. | Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity. | 0.875 |
Noc_0738 | rpoA | Noc_0738 | Noc_2300 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.790 |
Noc_0738 | rpoZ | Noc_0738 | Noc_1213 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.700 |
Noc_0739 | Noc_0738 | Noc_0739 | Noc_0738 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Noc_1032 | Noc_0738 | Noc_1032 | Noc_0738 | Hypothetical protein. | Hypothetical protein. | 0.861 |
Noc_1032 | Noc_2220 | Noc_1032 | Noc_2220 | Hypothetical protein. | Hypothetical protein. | 0.966 |
Noc_1032 | alaS | Noc_1032 | Noc_0926 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.969 |
Noc_1032 | htpG | Noc_1032 | Noc_1718 | Hypothetical protein. | Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity. | 0.413 |
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