STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noc_0743Hypothetical protein. (319 aa)    
Predicted Functional Partners:
Noc_0745
Hypothetical protein.
 
     0.838
Noc_0742
Glycosyl transferase, group 1.
 
     0.752
Noc_0746
Integrins alpha chain.
 
    0.650
Noc_2093
Integrins alpha chain.
  
     0.649
Noc_1762
Integrins alpha chain.
  
     0.645
Noc_2094
Integrins alpha chain.
  
     0.642
Noc_2092
Integrins alpha chain.
  
     0.635
Noc_0741
Hypothetical protein.
       0.607
Noc_0740
Sulfatase.
       0.583
Noc_2091
Conserved hypothetical protein.
  
     0.532
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.