STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noc_0862Diguanylate cyclase/phosphodiesterase. (571 aa)    
Predicted Functional Partners:
Noc_1271
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
 
 
0.996
Noc_0376
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
 
 
0.995
Noc_1758
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
 
 
0.994
Noc_2682
Diguanylate cyclase/phosphodiesterase.
 
 
0.985
Noc_0226
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
 
0.984
Noc_2021
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
 
0.983
Noc_1601
CheB methylesterase, CheR methyltransferase, hybrid histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.972
Noc_1609
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s).
 
 
0.940
Noc_2986
PAS domain protein.
 
 0.934
Noc_1400
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.890
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
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